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Tryptophan metabolism

crohn's disease

Tryptophan metabolism has meaningful literature visibility in crohn's disease, but the current evidence mix suggests a substantial risk of overclaiming.

Tryptophan metabolism shows a moderate evidence base in crohn's disease, with multiple central papers and additional supporting literature.

tryptophan_metabolism
Credibility score
45
Human translation
1/5
Reproducibility
5/5
Novelty
2/5
Actionability
2/5
Credibility 45Human translation 1/5Reproducibility 5/5Novelty 2/5Actionability 2/5
Why this scores the way it does
  • moderate central evidence base
  • dense review literature
  • substantial preclinical support
Main caveats
  • preclinical evidence outweighs human evidence
  • review density exceeds central evidence depth
  • retrieval noise or disease-specificity issues may remain

Internal review flags

2 flags
preclinical_heavy

Preclinical evidence exceeds central human evidence. Interpret translational relevance cautiously.

review_heavy

Review literature is very dense relative to primary central evidence.

Primary central evidence

7 papers
Inflammation-Induced Mucosal KYNU Expression Identifies Human Ileal Crohn's Disease.
2020
Journal of clinical medicine
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Tryptophan degradation as a systems phenomenon in inflammation - an analysis across 13 chronic inflammatory diseases.
2024
EBioMedicine
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Serum Metabolites Relate to Mucosal and Transmural Inflammation in Paediatric Crohn Disease.
2024
Journal of Crohn's & colitis
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Novel cross-feeding human gut microbes metabolizing tryptophan to indole-3-propionate.
2025
Gut microbes
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Metabolic modeling reveals a multi-level deregulation of host-microbiome metabolic networks in IBD.
2025
Nature communications
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Impact of terminal ileal microbiota dysbiosis and tryptophan metabolism alterations on mental disorders in patients with Crohn's disease.
2025
BMC gastroenterology
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Pathobiont-triggered induction of goblet cell response drives regional susceptibility to inflammatory bowel disease.
2026
The Journal of clinical investigation
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.

Supporting primary evidence

1 papers
Enhanced mucosal mitochondrial function corrects dysbiosis and OXPHOS metabolism in IBD.
2024
bioRxiv : the preprint server for biology
Relevant preprint retained as supporting evidence, not central evidence.

Preclinical supporting evidence

22 papers
CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands.
2016
Nature medicine
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Indoleacrylic Acid Produced by Commensal Peptostreptococcus Species Suppresses Inflammation.
2017
Cell host & microbe
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Increased Tryptophan Metabolism Is Associated With Activity of Inflammatory Bowel Diseases.
2017
Gastroenterology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Palmatine ameliorated murine colitis by suppressing tryptophan metabolism and regulating gut microbiota.
2018
Pharmacological research
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Microbial tryptophan metabolites regulate gut barrier function via the aryl hydrocarbon receptor.
2020
Proceedings of the National Academy of Sciences of the United States of America
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Deletion of ghrelin alters tryptophan metabolism and exacerbates experimental ulcerative colitis in aged mice.
2022
Experimental biology and medicine (Maywood, N.J.)
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Effect of 5-Hydroxytryptophan on Fatigue in Quiescent Inflammatory Bowel Disease: A Randomized Controlled Trial.
2022
Gastroenterology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Rewiring the altered tryptophan metabolism as a novel therapeutic strategy in inflammatory bowel diseases.
2023
Gut
Disease-relevant preclinical or model-based paper useful as supporting evidence.
DSS-induced colitis activates the kynurenine pathway in serum and brain by affecting IDO-1 and gut microbiota.
2022
Frontiers in immunology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Pulsatilla chinensis saponins ameliorated murine depression by inhibiting intestinal inflammation mediated IDO1 overexpression and rebalancing tryptophan metabolism.
2023
Phytomedicine : international journal of phytotherapy and phytopharmacology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Wogonin improves colitis by activating the AhR pathway to regulate the plasticity of ILC3/ILC1.
2024
Phytomedicine : international journal of phytotherapy and phytopharmacology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Gut microbiota metabolite indole-3-acetic acid maintains intestinal epithelial homeostasis through mucin sulfation.
2024
Gut microbes
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Vinegar-processed Schisandra Chinensis enhanced therapeutic effects on colitis-induced depression through tryptophan metabolism.
2024
Phytomedicine : international journal of phytotherapy and phytopharmacology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Clostridium sporogenes-derived metabolites protect mice against colonic inflammation.
2024
Gut microbes
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Impaired Kynurenine Pathway in Inflammatory Bowel Disease.
2024
Journal of clinical medicine
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Atractylodes macrocephala Koidz polysaccharide ameliorates DSS-induced colitis in mice by regulating the gut microbiota and tryptophan metabolism.
2025
British journal of pharmacology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Integrating single-cell RNA-Seq and machine learning to dissect tryptophan metabolism in ulcerative colitis.
2024
Journal of translational medicine
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Gut microbiota-derived tryptophan metabolites regulated by Wuji Wan to attenuate colitis through AhR signaling activation.
2025
Acta pharmaceutica Sinica. B
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Lacticaseibacillus rhamnosus GG-driven remodeling of arginine metabolism mitigates gut barrier dysfunction.
2025
American journal of physiology. Gastrointestinal and liver physiology
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Prenatal supplementation with the gut-derived tryptophan metabolite indole-3-propionic acid alleviates colitis susceptibility in maternal immune-activated offspring mice.
2026
Journal of advanced research
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Xanthohumol Alleviates Inflammatory Bowel Disease-Associated Osteoporosis via Regulating Gut Microbial Metabolites.
2025
Phytotherapy research : PTR
Disease-relevant preclinical or model-based paper useful as supporting evidence.
Akkermansia muciniphila-derived extracellular vesicles alleviate colitis-related cognitive impairment via tryptophan metabolic reprogramming of the gut‒brain axis.
2026
Gut microbes
Disease-relevant preclinical or model-based paper useful as supporting evidence.

Review supporting evidence

23 papers
Tryptophan: A gut microbiota-derived metabolites regulating inflammation.
2017
World journal of gastrointestinal pharmacology and therapeutics
Relevant review or meta-analysis for the signal-disease area.
Beneficial actions of microbiota-derived tryptophan metabolites.
2018
Neurogastroenterology and motility
Relevant review or meta-analysis for the signal-disease area.
Impact of the Gut Microbiota on Intestinal Immunity Mediated by Tryptophan Metabolism.
2018
Frontiers in cellular and infection microbiology
Relevant review or meta-analysis for the signal-disease area.
Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease.
2018
Cell host & microbe
Relevant review or meta-analysis for the signal-disease area.
Glutamatergic Signaling Along The Microbiota-Gut-Brain Axis.
2019
International journal of molecular sciences
Relevant review or meta-analysis for the signal-disease area.
Gut microbiota-derived metabolites as key actors in inflammatory bowel disease.
2020
Nature reviews. Gastroenterology & hepatology
Relevant review or meta-analysis for the signal-disease area.
Tryptophan Metabolism, Regulatory T Cells, and Inflammatory Bowel Disease: A Mini Review.
2020
Mediators of inflammation
Relevant review or meta-analysis for the signal-disease area.
Dietary and Nutritional Approaches to the Management of Chronic Enteropathy in Dogs and Cats.
2021
The Veterinary clinics of North America. Small animal practice
Relevant review or meta-analysis for the signal-disease area.
ACE2 and gut amino acid transport.
2020
Clinical science (London, England : 1979)
Relevant review or meta-analysis for the signal-disease area.
Impact of Microbial Metabolites on Microbiota-Gut-Brain Axis in Inflammatory Bowel Disease.
2021
International journal of molecular sciences
Relevant review or meta-analysis for the signal-disease area.
Tryptophan Metabolism and Gut-Brain Homeostasis.
2021
International journal of molecular sciences
Relevant review or meta-analysis for the signal-disease area.
Impact of Bacterial Metabolites on Gut Barrier Function and Host Immunity: A Focus on Bacterial Metabolism and Its Relevance for Intestinal Inflammation.
2021
Frontiers in immunology
Relevant review or meta-analysis for the signal-disease area.
Tryptophan-kynurenine metabolism: a link between the gut and brain for depression in inflammatory bowel disease.
2021
Journal of neuroinflammation
Relevant review or meta-analysis for the signal-disease area.
Tryptophan-derived serotonin-kynurenine balance in immune activation and intestinal inflammation.
2021
FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Relevant review or meta-analysis for the signal-disease area.
Dietary Patterns and Gut Microbiota: The Crucial Actors in Inflammatory Bowel Disease.
2022
Advances in nutrition (Bethesda, Md.)
Relevant review or meta-analysis for the signal-disease area.
Disturbances of the Gut Microbiota and Microbiota-Derived Metabolites in Inflammatory Bowel Disease.
2022
Nutrients
Relevant review or meta-analysis for the signal-disease area.
The Tryptophan and Kynurenine Pathway Involved in the Development of Immune-Related Diseases.
2023
International journal of molecular sciences
Relevant review or meta-analysis for the signal-disease area.
IDO/Kynurenine; novel insight for treatment of inflammatory diseases.
2023
Cytokine
Relevant review or meta-analysis for the signal-disease area.
The role of intestinal microbes on intestinal barrier function and host immunity from a metabolite perspective.
2023
Frontiers in immunology
Relevant review or meta-analysis for the signal-disease area.
Untargeted faecal metabolomics for the discovery of biomarkers and treatment targets for inflammatory bowel diseases.
2024
Gut
Relevant review or meta-analysis for the signal-disease area.
Therapeutic mechanisms of exclusive enteral nutrition in Crohn's disease.
2025
Seminars in immunopathology
Relevant review or meta-analysis for the signal-disease area.
Tryptophan metabolism and the intestinal microbiota: Implications for inflammatory bowel disease.
2025
Microbiological research
Relevant review or meta-analysis for the signal-disease area.
The gut microbiota and its metabolites: novel therapeutic targets for inflammatory bowel disease.
2025
Frontiers in immunology
Relevant review or meta-analysis for the signal-disease area.