A decrease of the butyrate-producing species Roseburia hominis and Faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis.
2014Gut
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Treatment of Active Crohn's Disease With an Ordinary Food-based Diet That Replicates Exclusive Enteral Nutrition.
2019Gastroenterology
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Pivotal Roles for pH, Lactate, and Lactate-Utilizing Bacteria in the Stability of a Human Colonic Microbial Ecosystem.
2020mSystems
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Healthy Cotwins Share Gut Microbiome Signatures With Their Inflammatory Bowel Disease Twins and Unrelated Patients.
2021Gastroenterology
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Dysbiosis and relapse-related microbiome in inflammatory bowel disease: A shotgun metagenomic approach.
2021Computational and structural biotechnology journal
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Association between Fecal Short-Chain Fatty Acid Levels, Diet, and Body Mass Index in Patients with Inflammatory Bowel Disease.
2022Biology
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Association between fecal levels of Short-Chain Fatty Acids and serum Pro- and Anti-Inflammatory Cytokines in patients with Inflammatory Bowel Disease.
2022Folia medica Cracoviensia
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
The Importance of Nutritional Aspects in the Assessment of Inflammation and Intestinal Barrier in Patients with Inflammatory Bowel Disease.
2022Nutrients
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Diarrheal-associated gut dysbiosis in cancer and inflammatory bowel disease patients is exacerbated by Clostridioides difficile infection.
2023Frontiers in cellular and infection microbiology
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Novel cross-feeding human gut microbes metabolizing tryptophan to indole-3-propionate.
2025Gut microbes
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
In vitro fermentation of yeast cell walls (mannan-oligosaccharide) and purified β-glucans modulates the colonic microbiota of dogs with inflammatory bowel disease and demonstrates protective effects on barrier integrity and anti-inflammatory properties.
2025PloS one
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Microbiome multi-omics analysis reveals novel biomarkers and mechanisms linked with CD etiopathology.
2025Biomarker research
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
Colorectal adenoma presence is associated with decreased menaquinone pathway functions in the gut microbiome of patients undergoing routine colonoscopy.
2026PloS one
Direct disease-relevant human paper with strong clinical, biomarker, or mechanistic framing.
